Luise Modersohn

Curriculum Vitae

• since 2022: Leader of the Junior Research Group De.xt at MRI/TU Munich
• since 2018: Research Assistant at the JULIE Lab of Friedrich Schiller University Jena
• 2014 - 2018: Research Assistant at the Computer Vision Group of Friedrich Schiller University Jena
• 2014: Master Thesis “Parallelisierung und Erweiterung einer Bibliothek für die Untersuchung optimaler Regulationsvorgänge in Stoffwechselwegen”
• 2012: Bachelor Thesis “Homological Search of the hok/sok Toxin-Antitoxin System in Bacteria”
• 2009 - 2014: Studies of Bioinformatics and Computational Biology at the Friedrich Schiller University Jena

Research Interests

• Natural Language Processing with clinical context
• Automatic generation of timelines from texts
• Hypergraphs and graph theory
• Bioinformatics and computational biology
• Computervision and machine learning

Projects Involved

• STAKI²B²
• SMITH

Teaching Experience

• Einführung in die Computerlinguistik und Sprachtechnologie (Introduction to computer linguistics and language technology)
• Korpusanalyse mit Python (Corpus analysis using Python)

Publications

2022

• Luise Modersohn, Stefan Schulz, Christina Lohr and Udo Hahn. GraSCCo — The First Publicly Shareable, Multiply-Alienated German Clinical Text Corpus; [GMDS 2022] [DOI: 10.3233/SHTI220805] [Slides] [Corpus @ Zenodo]

• Florian Borchert, Christina Lohr, Luise Modersohn, Jonas Witt, Thomas Langer, Markus Follmann, Matthias Gietzelt, Bert Arnrich, Udo Hahn and Matthieu-P. Schapranow. GGPONC 2.0 - The German Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline NER Taggers In: LREC 2022 - Proceedings of the 13th International Conference on Language Resources and Evaluation. Marseille, France, June 22-24, 2022. Pages 3650–3660. [Poster] [data-request@DKG] [Code on GitHub] [Code @ Zenodo] [Annotation guideline @ Zenodo]

2021

• Sven Buechel, Luise Modersohn and Udo Hahn. Towards Label-Agnostic Emotion Embeddings; [accepted at EMNLP’21]

2020

• Florian Borchert, Christina Lohr, Luise Modersohn, Thomas Langer, Markus Follmann, Jan Philipp Sachs, Udo Hahn, Matthieu-P. Schapranow: GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines. In Proceedings of the 11th International Workshop on Health Text Mining and Information Analysis EMNLP 2020, Nov 20 [ACL Anthology] [DOI:10.18653/v1/2020.louhi-1.5] [arXiv] [Code on GitHub] [Code @ Zenodo] [data-request@DKG] - Additional article in Gesundhyte (2020/12/13, pages 19-22)

• Christoph Weber, Lena Röschke, Luise Modersohn, Christina Lohr, Tobias Kolditz, Udo Hahn, Danny Ammon, Boris Betz, Michael Kiehntopf: Optimized Identification of Advanced Chronic Kidney Disease and Absence of Kidney Disease by Combining Different Electronic Health Data Resources and by Applying Machine Learning Strategies [PMCID: PMC7563476] [PMID: 32932685]

• Erik Faessler, Luise Modersohn, Christina Lohr, Udo Hahn: ProGene - A Large-scale, High-Quality Protein-Gene Annotated Benchmark Corpus; In: LREC 2020 - Proceedings of the 12th International Conference on Language Resources and Evaluation. Marseille, France, May 11-16, 2020. Pages 4587–4598. [Data on Zenodo] [ACL Anthology]

• Christina Lohr, Luise Modersohn, Johannes Hellrich, Tobias Kolditz, Udo Hahn: An Evolutionary Approach to the of Discharge Summaries. In: Studies in Health Technology and Informatics, Vol. 270: Digital Personalized Health and Medicine - Proceedings of MIE 2020 [PMID: 32570340][DOI:10.3233/SHTI200116] [Annotation guideline @ Zenodo]

2019

• Tobias Kolditz, Christina Lohr, Johannes Hellrich, Luise Modersohn, Boris Betz, Michael Kiehntopf, Udo Hahn: Annotating German Clinical Documents for De-Identification (MedInfo 2019 Aug 25-30 Lyon France) [Slides] [PMID:31437914] [DOI:10.3233/SHTI190212] [Annotation guideline @ Zenodo]

• Oliver Mothes, Luise Modersohn, Gerd Fabian Volk, Carsten Klingner, Otto W. Witte, Peter Schlattmann, Joachim Denzler and Orlando Guntinas-Lichius: Automated objective and marker-free facial grading using photographs of patients with facial palsy; In: European Archives of Oto-Rhino-Laryngology

• Gerd Fabian Volk, Rebecca Anna Schaede, Jovanna Thielker, Luise Modersohn, Oliver Mothes, Charles C. Nduka, Jodi Maron Barth, Joachim Denzler and Orlando Guntinas-Lichius.: Reliability of Grading of Facial Palsy using a Video Tutorial with Synchronous Video Recording. In: Laryngoscope

2018

• Christina Lohr, Stephanie Luther, Franz Matthies, Luise Modersohn, Danny Ammon, Kutaiba Saleh, Andreas G. Henkel, Michael Kiehntopf, and Udo Hahn: CDA-Compliant Section Annotation of German-Language Discharge Summaries: Guideline Development, Annotation Campaign, Section Classification. In: AMIA Annual Symposium Proceedings 2018, San Francisco, USA, Nov 3-7. [Slides] [PMCID: PMC6371337] [PMID: 30815119] [Annotation guideline @ Zenodo]

• Gerd Fabian Volk, Anika Steinerstauch, Annegret Lorenz, Luise Modersohn, Oliver Mothes, Joachim Denzler, Carsten M. Klingner, Farsin Hamzei and Orlando Guntinas-Lichius: Facial motor and non-motor disabilities in patients with central facial paresis: a prospective cohort study. In: Journal of Neurology (accepted)

2017

• Rebecca Anna Schaede, Gerd Fabian Volk, Luise Modersohn, Jodie Marion Barth, Joachim Denzler and Orlando Guntinas-Lichius: Video Instruction for Synchronous Video Recording of Mimic Movement of Patients with Facial Palsy. In: Laryngo-Rhino-Otologie 2017.

2016

• Luise Modersohn and Joachim Denzler: Facial Paresis Index Prediction by Exploiting Active Appearance Models for Compact Discriminative Features. In: International Conference on Computer Vision Theory and Applications (VISAPP) 2016.

Contact details

Luise Modersohn
Research Assistent

Email	Luise.Modersohn[at]uni-jena.de
Phone	+49 3641 9-44303
Postal Address	Fürstengraben 27 07743 Jena Germany

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